Scripts

This document contains all the scripts for/by CGAT. Scripts are written to be called from the command line.

Genomics

Trees

Alignment

Visualization

Graphs

Sequences and rates

Matrices and Tables

Stats

Tools

Databases

Cluster and jobs

Other

• cgat_html_add_toc.py - insert table of contents in html document

Unsorted

• mali_phylip2fasta.py -